Index

C

check_file_exists() (in module m2m.control) check_input_file() (in module m2m.control)

compute_transform_matrix() (in module m2m.transform) convert_point_to_um() (in module m2m.transform) convert_point_to_vox() (in module m2m.transform)

D

download_proj_density_vol() (in module m2m.allensdk_utils) download_struct_mask_vol() (in module m2m.allensdk_utils)

download_template_vol() (in module m2m.allensdk_utils) draw_spherical_mask() (in module m2m.util)

G

get_allen_coords() (in module m2m.transform) get_cache_dir() (in module m2m.control) get_injection_infos() (in module m2m.allensdk_utils) get_mcc() (in module m2m.allensdk_utils) get_mcc_exps() (in module m2m.allensdk_utils)

get_mcc_stree() (in module m2m.allensdk_utils) get_ornt_PIR_UserDataSpace() (in module m2m.transform) get_ornt_UserDataSpace_PIR() (in module m2m.transform) get_structure_parents_infos() (in module m2m.allensdk_utils) get_unionized_list() (in module m2m.allensdk_utils) get_user_coords() (in module m2m.transform)

L

load_user_template() (in module m2m.util)

M

m2m module m2m.allensdk_utils module m2m.control module m2m.transform module

m2m.util module module m2m m2m.allensdk_utils m2m.control m2m.transform m2m.util

P

pretransform_point_PIR_UserDataSpace() (in module m2m.transform) pretransform_point_UserDataSpace_PIR() (in module m2m.transform)

pretransform_vol_PIR_UserDataSpace() (in module m2m.transform) pretransform_vol_UserDataSpace_PIR() (in module m2m.transform)

R

registrate_allen2UserDataSpace() (in module m2m.transform)

S

save_nifti() (in module m2m.util)

search_experiments() (in module m2m.allensdk_utils) select_allen_bbox() (in module m2m.transform)